MLOC_16300 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains446.496424.478463.401509.653
LEAShoots from the seedlings (10 cm shoot stage)141.348288.73878.6656156.654
INF1Young developing inflorescences (5mm)32.02824.675523.987426.4898
INF2Developing inflorescences (1-1.5 cm)9.859179.8593323.957417.3384
ROORoots from the seedlings (10 cm shoot stage)565.891468.972429.952646.736
NODDeveloping tillers at six leaf stage, 3rd internode9.010010.5632090.1298381.31616
CAR5Developing grain, bracts removed (5 DPA)11.35579.024165.4791910.0021
CAR15Developing grain, bracts removed (15 DPA)0.2354650.3487690.1314790.747194



CDS Structure of MLOC_16300






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_16300.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK360669NoneNoneNoneNone
MLOC_16300.1CUST_1615_PI427708080AvailableAvailablecontig_1572998 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g03290.1 +3 0.0 620 318/434 (73%) 13111.m00267 protein nucleoside-triphosphatase, putative, expressed
TAIR PP10 AT3G04080.1 +3 1e-129 391 201/403 (50%) | Symbols: ATAPY1, APY1 | apyrase 1 | chr3:1068068-1070917 REVERSE LENGTH=471