MLOC_16299 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.627018.474526.865456.30132
LEAShoots from the seedlings (10 cm shoot stage)10.069613.008613.32729.1818
INF1Young developing inflorescences (5mm)13.056514.117315.81810.342
INF2Developing inflorescences (1-1.5 cm)17.202716.076517.98916.2266
ROORoots from the seedlings (10 cm shoot stage)2.264114.880554.929144.64071
NODDeveloping tillers at six leaf stage, 3rd internode13.874815.32615.347245.583
CAR5Developing grain, bracts removed (5 DPA)18.983520.876722.630217.3888
CAR15Developing grain, bracts removed (15 DPA)7.1354210.63589.7512417.6181



CDS Structure of MLOC_16299






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK248142.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248142.1CUST_18509_PI427708080NoneNoneNone
MLOC_1364.1NoneAvailableNonecontig_111956 (Mapped)
MLOC_16299.5NoneAvailableAvailablecontig_157299 (Mapped)
MLOC_48269.1NoneAvailableNonecontig_320422 (Mapped)
MLOC_49390.1NoneAvailableNonecontig_340818 (Mapped)
MLOC_62357.1NoneAvailableNonecontig_464852 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----