MLOC_16296 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.9128811.027810.74199.74816
LEAShoots from the seedlings (10 cm shoot stage)7.724915.932315.988875.52555
INF1Young developing inflorescences (5mm)30.743628.262326.246621.8249
INF2Developing inflorescences (1-1.5 cm)28.347726.96523.959926.7781
ROORoots from the seedlings (10 cm shoot stage)5.442619.077258.574199.83986
NODDeveloping tillers at six leaf stage, 3rd internode4.033755.115445.6652517.6365
CAR5Developing grain, bracts removed (5 DPA)10.51159.4035710.19728.7606
CAR15Developing grain, bracts removed (15 DPA)6.380876.746025.9970313.0253



CDS Structure of MLOC_16296






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_16296.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_16296.2CUST_9425_PI427708080AvailableAvailablecontig_1572981 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g10690.1 -3 0.0 581 345/492 (70%) 13101.m01155 protein POLD3 - Putative DNA polymerase delta complex subunit, expressed
TAIR PP10 AT1G78650.1 -3 8e-70 242 190/510 (37%) | Symbols: POLD3 | DNA-directed DNA polymerases | chr1:29582987-29585508 FORWARD LENGTH=509