- Predicted Gene MLOC_16279
MLOC_16279 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_16279_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_16279_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 53.5825 | 83.1464 | 75.6316 | 73.1975 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 64.4944 | 41.6137 | 40.4147 | 43.311 |
INF1 | Young developing inflorescences (5mm) | 106.971 | 94.8864 | 85.2304 | 80.4121 |
INF2 | Developing inflorescences (1-1.5 cm) | 83.5036 | 97.7751 | 84.6418 | 96.8992 |
ROO | Roots from the seedlings (10 cm shoot stage) | 44.0913 | 76.2328 | 54.4212 | 86.3749 |
NOD | Developing tillers at six leaf stage, 3rd internode | 52.693 | 59.5501 | 35.7681 | 194.467 |
CAR5 | Developing grain, bracts removed (5 DPA) | 112.07 | 102.78 | 108.893 | 102.154 |
CAR15 | Developing grain, bracts removed (15 DPA) | 39.5673 | 37.767 | 36.9592 | 84.8478 |
CDS Structure of MLOC_16279
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_16279.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g12820.1 |
+3 |
0.0 |
1463 |
799/991 (81%) |
13108.m01368 protein proteasome/cyclosome repeat containing protein, expressed |
TAIR PP10 |
AT2G32730.1 |
+3 |
0.0 |
1335 |
738/996 (74%) |
26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit | chr2:13880189-13885464 FORWARD LENGTH=1004 |