MLOC_16262 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains19.732622.917621.038818.6661
LEAShoots from the seedlings (10 cm shoot stage)14.171810.264910.78078.33047
INF1Young developing inflorescences (5mm)15.446817.112818.856212.9362
INF2Developing inflorescences (1-1.5 cm)8.0650310.18939.168928.90015
ROORoots from the seedlings (10 cm shoot stage)25.100819.783217.318218.6946
NODDeveloping tillers at six leaf stage, 3rd internode14.800816.27227.352941.8067
CAR5Developing grain, bracts removed (5 DPA)19.38717.994522.58716.7575
CAR15Developing grain, bracts removed (15 DPA)4.719763.611062.939938.55406



CDS Structure of MLOC_16262






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_16262.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_16262.1NoneAvailableAvailablecontig_157290 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g45910.1 +1 8e-85 278 154/170 (91%) 13101.m04713 protein plastidic ATP/ADP-transporter, putative, expressed
TAIR PP10 AT1G15500.1 +1 9e-76 252 138/173 (80%) | Symbols: ATNTT2 | TLC ATP/ADP transporter | chr1:5326426-5328688 FORWARD LENGTH=618