MLOC_16261 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)1.236581.04771.281730.918629
CAR15Developing grain, bracts removed (15 DPA)0.1375720.1391870.2997670.348736



CDS Structure of MLOC_16261






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_16261.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_16261.1CUST_9419_PI427708080AvailableAvailablecontig_1572895 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g29370.1 -3 1e-48 165 81/172 (47%) 13112.m02981 protein ZmEBE-1 protein, putative
TAIR PP10 AT5G18460.1 -3 1e-23 101 62/173 (36%) Protein of Unknown Function (DUF239) | chr5:6123205-6126505 FORWARD LENGTH=430