MLOC_16235 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.0575899000.0906101
LEAShoots from the seedlings (10 cm shoot stage)0.1191970.08858900.0871381
INF1Young developing inflorescences (5mm)0.02026910.06859890.02598940.0333091
INF2Developing inflorescences (1-1.5 cm)0.03877630.1493790.07482550.104885
ROORoots from the seedlings (10 cm shoot stage)0.04952130.11319800.163658
NODDeveloping tillers at six leaf stage, 3rd internode00.02816280.05793730.143955
CAR5Developing grain, bracts removed (5 DPA)0.1693890.2048460.1504120.16796
CAR15Developing grain, bracts removed (15 DPA)0.03973930.022392500.101045



CDS Structure of MLOC_16235






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_16235.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373459NoneNoneNoneNone
MLOC_16235.2CUST_1609_PI427708080AvailableAvailablecontig_1572826 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g13710.1 +2 0.0 903 458/686 (67%) 13101.m01507 protein transposon protein, putative, unclassified, expressed
TAIR PP10 AT1G65730.1 +2 0.0 627 320/682 (47%) | Symbols: YSL7 | YELLOW STRIPE like 7 | chr1:24442639-24446122 FORWARD LENGTH=688