- Predicted Gene MLOC_16227
MLOC_16227 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_16227_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_16227_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 28.7424 | 26.4087 | 29.1009 | 26.9973 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 20.8583 | 21.9606 | 22.1447 | 18.3854 |
INF1 | Young developing inflorescences (5mm) | 42.4888 | 46.2034 | 46.8248 | 36.2114 |
INF2 | Developing inflorescences (1-1.5 cm) | 32.9632 | 33.1164 | 37.7887 | 35.5518 |
ROO | Roots from the seedlings (10 cm shoot stage) | 14.7302 | 27.9515 | 35.5748 | 31.6132 |
NOD | Developing tillers at six leaf stage, 3rd internode | 20.3729 | 14.5319 | 23.4131 | 53.5543 |
CAR5 | Developing grain, bracts removed (5 DPA) | 18.5014 | 20.694 | 18.2238 | 17.9997 |
CAR15 | Developing grain, bracts removed (15 DPA) | 9.3315 | 9.36697 | 7.59456 | 19.5082 |
CDS Structure of MLOC_16227
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_16227.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g28640.1 |
+2 |
9e-140 |
418 |
208/223 (93%) |
13110.m02443 protein RIO1 family protein, expressed |
TAIR PP10 |
AT5G26110.1 |
+2 |
7e-118 |
346 |
167/226 (74%) |
Protein kinase superfamily protein | chr5:9118239-9119352 REVERSE LENGTH=226 |