- Predicted Gene MLOC_16202
MLOC_16202 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 26.4057 | 17.708 | 18.2813 | 20.5443 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 6.97309 | 6.77228 | 8.67895 | 6.15432 |
| INF1 | Young developing inflorescences (5mm) | 25.6418 | 29.6789 | 29.4712 | 26.2642 |
| INF2 | Developing inflorescences (1-1.5 cm) | 28.3944 | 25.6343 | 25.6344 | 32.3642 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 27.3442 | 18.591 | 20.2372 | 23.3816 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.95993 | 2.70287 | 6.0411 | 9.60423 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 15.3358 | 16.2349 | 15.7526 | 17.2872 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.79372 | 3.39812 | 2.36807 | 8.57446 |
CDS Structure of MLOC_16202
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_16202.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g03790.1 |
-1 |
3e-78 |
235 |
117/145 (81%) |
13106.m00321 protein 39S ribosomal protein L47, mitochondrial precursor, putative, expressed |
| TAIR PP10 |
AT1G07830.1 |
-1 |
2e-61 |
191 |
97/143 (68%) |
ribosomal protein L29 family protein | chr1:2422549-2423392 FORWARD LENGTH=144 |