MLOC_16197 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.451283.616473.795684.14816
LEAShoots from the seedlings (10 cm shoot stage)2.40271.938274.674182.74419
INF1Young developing inflorescences (5mm)6.459836.130197.187575.79074
INF2Developing inflorescences (1-1.5 cm)4.865285.328274.652015.89533
ROORoots from the seedlings (10 cm shoot stage)3.190844.976453.051566.14935
NODDeveloping tillers at six leaf stage, 3rd internode0.3367820.7039391.034942.46095
CAR5Developing grain, bracts removed (5 DPA)3.513493.687574.847774.34727
CAR15Developing grain, bracts removed (15 DPA)2.089081.570451.635644.48246



CDS Structure of MLOC_16197






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_16197.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_16197.1CUST_2337_PI427708083AvailableAvailablecontig_1572700 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g44770.1 -2 2e-30 115 81/143 (57%) 13104.m04476 protein expressed protein
TAIR PP10None-----