- Predicted Gene MLOC_16173
MLOC_16173 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.181478 | 0.102631 | 0.186542 | 0.153518 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0.0212488 | 0 | 0.0181735 |
| INF1 | Young developing inflorescences (5mm) | 0.153089 | 0.216487 | 0.15103 | 0.160266 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.265892 | 0.318237 | 0.381999 | 0.363184 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.0853242 | 0.0857746 | 0.0740894 | 0.120788 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.0569852 | 0.308327 | 0.159614 | 1.07119 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 2.34996 | 1.85623 | 2.13581 | 2.13229 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.16075 | 1.73212 | 1.74877 | 4.5577 |
CDS Structure of MLOC_16173
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_16173.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g32430.1 |
-1 |
0.0 |
1578 |
886/1115 (79%) |
13107.m03288 protein pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16, putative, expressed |
| TAIR PP10 |
AT5G13010.1 |
-1 |
0.0 |
1376 |
756/1005 (75%) |
| Symbols: EMB3011 | RNA helicase family protein | chr5:4122747-4128660 FORWARD LENGTH=1255 |