MLOC_16151 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains46.245238.724539.198939.3558
LEAShoots from the seedlings (10 cm shoot stage)17.207817.731310.729812.2383
INF1Young developing inflorescences (5mm)2.902183.621323.297632.84814
INF2Developing inflorescences (1-1.5 cm)1.958431.294981.682871.78123
ROORoots from the seedlings (10 cm shoot stage)40.03629.541429.344234.6584
NODDeveloping tillers at six leaf stage, 3rd internode12.454413.386922.12445.9804
CAR5Developing grain, bracts removed (5 DPA)0.8185330.7978430.8557120.808471
CAR15Developing grain, bracts removed (15 DPA)0.08759280.1988920.1693630.366513



CDS Structure of MLOC_16151






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_16151.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK368205NoneNoneNoneNone
MLOC_16151.2CUST_1601_PI427708080AvailableAvailablecontig_1572546 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g16146.1 -2 5e-143 417 228/310 (74%) 13101.m01794 protein phenazine biosynthesis protein, putative, expressed
TAIR PP10 AT4G02860.1 -2 2e-83 263 146/297 (49%) Phenazine biosynthesis PhzC/PhzF protein | chr4:1268952-1270508 REVERSE LENGTH=313