MLOC_1613 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_1613_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_1613_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 8.16724 | 12.138 | 11.4142 | 10.7145 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 8.89858 | 5.94893 | 6.00692 | 5.73865 |
INF1 | Young developing inflorescences (5mm) | 12.6853 | 12.7867 | 14.0032 | 11.6178 |
INF2 | Developing inflorescences (1-1.5 cm) | 16.5321 | 15.6853 | 21.4249 | 19.1637 |
ROO | Roots from the seedlings (10 cm shoot stage) | 7.81068 | 9.4279 | 14.2417 | 10.9114 |
NOD | Developing tillers at six leaf stage, 3rd internode | 13.6165 | 9.20462 | 8.12994 | 26.3305 |
CAR5 | Developing grain, bracts removed (5 DPA) | 12.3547 | 12.683 | 12.7498 | 12.5283 |
CAR15 | Developing grain, bracts removed (15 DPA) | 5.89383 | 4.39628 | 5.07959 | 12.3709 |
CDS Structure of MLOC_1613
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_1613.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g40890.1 |
+2 |
9e-19 |
88 |
65/123 (53%) |
13112.m04260 protein OsIAA30 - Auxin-responsive Aux/IAA gene family member, expressed |
TAIR PP10 |
AT4G13510.1 |
-1 |
5e-14 |
75 |
34/47 (72%) |
| Symbols: AMT1;1, ATAMT1, ATAMT1;1 | ammonium transporter 1;1 | chr4:7858220-7859725 FORWARD LENGTH=501 |