- Predicted Gene MLOC_16079
MLOC_16079 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.32646 | 2.51612 | 0.964959 | 2.30069 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.14354 | 0 | 1.51487 | 1.16934 |
| INF1 | Young developing inflorescences (5mm) | 3.71989 | 3.82674 | 3.94433 | 2.90075 |
| INF2 | Developing inflorescences (1-1.5 cm) | 4.79121 | 3.93286 | 4.62026 | 4.33917 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0.333862 | 0 | 1.38689 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.832468 | 1.62502 | 5.26885 | 6.34808 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 2.65326 | 1.47527 | 0.358542 | 1.38382 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.338614 | 0 | 0 | 1.23767 |
CDS Structure of MLOC_16079
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_16079.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g72880.1 |
+2 |
2e-31 |
107 |
48/65 (74%) |
13101.m07948 protein DNA mismatch repair protein Mlh1, putative, expressed |
| TAIR PP10 |
AT4G09140.1 |
+2 |
2e-26 |
97 |
42/65 (65%) |
| Symbols: ATMLH1, MLH1 | MUTL-homologue 1 | chr4:5817107-5821035 REVERSE LENGTH=737 |