MLOC_16037 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.2651420.1990670.2213060.244606
LEAShoots from the seedlings (10 cm shoot stage)0.043144200.1054490.0656404
INF1Young developing inflorescences (5mm)0.1065430.02506910.07956130.0643099
INF2Developing inflorescences (1-1.5 cm)0.04555180.08628860.05360360.0881328
ROORoots from the seedlings (10 cm shoot stage)00.1045460.1477870.205825
NODDeveloping tillers at six leaf stage, 3rd internode0.01763360.0278080.007358590.0637127
CAR5Developing grain, bracts removed (5 DPA)2.272422.502872.298722.7399
CAR15Developing grain, bracts removed (15 DPA)1.054991.306961.630713.76423



CDS Structure of MLOC_16037






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_16037.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376562NoneNoneNoneNone
MLOC_16037.3CUST_1590_PI427708080AvailableAvailablecontig_1572196 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g50110.1 -3 7e-88 275 161/257 (63%) 13101.m05216 protein MYB family transcription factor, putative, expressed
TAIR PP10 AT3G13540.1 -3 1e-64 213 113/223 (51%) | Symbols: ATMYB5, MYB5 | myb domain protein 5 | chr3:4420239-4421443 FORWARD LENGTH=249