MLOC_16026 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains32.980339.042834.559332.4283
LEAShoots from the seedlings (10 cm shoot stage)29.172814.399614.258715.3186
INF1Young developing inflorescences (5mm)31.725831.979228.539423.6408
INF2Developing inflorescences (1-1.5 cm)22.795323.566820.515422.634
ROORoots from the seedlings (10 cm shoot stage)27.003938.369336.705637.4141
NODDeveloping tillers at six leaf stage, 3rd internode64.03323.766214.830361.8643
CAR5Developing grain, bracts removed (5 DPA)22.788121.978324.986920.335
CAR15Developing grain, bracts removed (15 DPA)8.548867.417927.3083216.8267



CDS Structure of MLOC_16026






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_16026.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_16026.4CUST_11472_PI427708083AvailableAvailablecontig_1572151 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g12170.1 +1 9e-24 101 51/52 (98%) 13107.m24462 protein ADP-ribosylation factor, putative, expressed
TAIR PP10 AT2G47170.1 +1 1e-23 97 49/50 (98%) | Symbols: ARF1A1C | Ras-related small GTP-binding family protein | chr2:19367264-19368518 FORWARD LENGTH=181