MLOC_16024 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.02595040.03722410.0370639
LEAShoots from the seedlings (10 cm shoot stage)0.2180441.202142.083841.03361
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0.05490200.07892850.0465359
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)000.02699510.0255144
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_16024






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_16024.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_16024.2CUST_9394_PI427708080AvailableAvailablecontig_1572144 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g17760.1 +3 9e-120 370 247/507 (49%) 13102.m01984 protein cytochrome P450, putative, expressed
TAIR PP10 AT2G30750.1 +3 2e-73 247 173/492 (35%) | Symbols: CYP71A12 | cytochrome P450, family 71, subfamily A, polypeptide 12 | chr2:13099486-13101389 REVERSE LENGTH=503