MLOC_16007 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains111.70989.697399.7165101.832
LEAShoots from the seedlings (10 cm shoot stage)6.04623.286793.634423.72198
INF1Young developing inflorescences (5mm)1.745231.249470.9558751.1879
INF2Developing inflorescences (1-1.5 cm)1.522981.480321.819191.82457
ROORoots from the seedlings (10 cm shoot stage)161.718114.17474.0138138.656
NODDeveloping tillers at six leaf stage, 3rd internode4.647363.591318.4754114.1564
CAR5Developing grain, bracts removed (5 DPA)0.5637220.7463250.6526510.701569
CAR15Developing grain, bracts removed (15 DPA)1.106981.177891.525782.92476



CDS Structure of MLOC_16007






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_16007.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369177NoneNoneNoneNone
MLOC_16007.1CUST_17935_PI427708080AvailableAvailablecontig_1572096 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g08190.1 -2 9e-127 374 193/280 (69%) 13109.m00677 protein sulfotransferase domain containing protein, expressed
TAIR PP10 AT5G07010.1 -2 4e-77 248 142/327 (43%) | Symbols: ATST2A, ST2A | sulfotransferase 2A | chr5:2174960-2176039 REVERSE LENGTH=359