MLOC_16006 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.487877.422679.295477.4529
LEAShoots from the seedlings (10 cm shoot stage)0.5697781.062751.157920.708407
INF1Young developing inflorescences (5mm)0.0238219000.0217887
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)14.20529.299567.809229.86498
NODDeveloping tillers at six leaf stage, 3rd internode1.070071.775327.15377.57399
CAR5Developing grain, bracts removed (5 DPA)0.0882950.1121920.114260.102937
CAR15Developing grain, bracts removed (15 DPA)0.3969130.4600670.4119011.03471



CDS Structure of MLOC_16006






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_16006.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_16006.1CUST_9391_PI427708080AvailableAvailablecontig_1572096 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g41460.1 +1 1e-124 375 192/349 (55%) 13107.m04314 protein sulfotransferase domain containing protein, expressed
TAIR PP10 AT1G13420.1 +1 7e-80 258 138/316 (44%) | Symbols: ATST4B, ST4B | sulfotransferase 4B | chr1:4604871-4605866 FORWARD LENGTH=331