MLOC_1600 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.2006870.5467370.5803880
LEAShoots from the seedlings (10 cm shoot stage)0.3553260.347770.5192670
INF1Young developing inflorescences (5mm)0.6050340.190360.9558690
INF2Developing inflorescences (1-1.5 cm)1.495141.434781.071820
ROORoots from the seedlings (10 cm shoot stage)00.47669500
NODDeveloping tillers at six leaf stage, 3rd internode0.2681790.4569690.4484930
CAR5Developing grain, bracts removed (5 DPA)0.5454360.7263091.046970
CAR15Developing grain, bracts removed (15 DPA)0.3186540.3142370.9254140



CDS Structure of MLOC_1600






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK377097
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK377097NoneNoneNoneNone
MLOC_1600.3NoneAvailableNonecontig_114119 (Mapped)
MLOC_35470.4NoneAvailableAvailablecontig_248969 (Mapped)
MLOC_47067.3NoneAvailableNonecontig_300158 (Mapped)
MLOC_48768.1NoneAvailableNonecontig_329312 (Mapped)
MLOC_8720.1NoneAvailableNonecontig_145713 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----