- Predicted Gene MLOC_15958
MLOC_15958 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_15958_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_15958_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 39.5816 | 23.6806 | 27.2917 | 25.4459 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 15.4257 | 1.52821 | 2.27502 | 5.69623 |
INF1 | Young developing inflorescences (5mm) | 48.4583 | 64.6838 | 59.0976 | 42.0153 |
INF2 | Developing inflorescences (1-1.5 cm) | 37.2023 | 47.7903 | 37.9301 | 42.2262 |
ROO | Roots from the seedlings (10 cm shoot stage) | 25.948 | 13.1214 | 17.7742 | 16.4489 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.65164 | 2.26842 | 1.75189 | 5.83952 |
CAR5 | Developing grain, bracts removed (5 DPA) | 16.6612 | 19.2682 | 18.7079 | 16.075 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.58923 | 1.14114 | 0.774881 | 2.82808 |
CDS Structure of MLOC_15958
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_15958.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g38560.1 |
-2 |
1e-13 |
66 |
33/33 (100%) |
13105.m04047 protein Core histone H2A/H2B/H3/H4 domain containing protein, putative |
TAIR PP10 |
AT3G09480.1 |
-2 |
1e-13 |
64 |
32/33 (97%) |
Histone superfamily protein | chr3:2914890-2915270 REVERSE LENGTH=126 |