MLOC_15958 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains39.581623.680627.291725.4459
LEAShoots from the seedlings (10 cm shoot stage)15.42571.528212.275025.69623
INF1Young developing inflorescences (5mm)48.458364.683859.097642.0153
INF2Developing inflorescences (1-1.5 cm)37.202347.790337.930142.2262
ROORoots from the seedlings (10 cm shoot stage)25.94813.121417.774216.4489
NODDeveloping tillers at six leaf stage, 3rd internode2.651642.268421.751895.83952
CAR5Developing grain, bracts removed (5 DPA)16.661219.268218.707916.075
CAR15Developing grain, bracts removed (15 DPA)1.589231.141140.7748812.82808



CDS Structure of MLOC_15958






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_15958.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_15958.1CUST_11471_PI427708083AvailableAvailablecontig_1571967 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g38560.1 -2 1e-13 66 33/33 (100%) 13105.m04047 protein Core histone H2A/H2B/H3/H4 domain containing protein, putative
TAIR PP10 AT3G09480.1 -2 1e-13 64 32/33 (97%) Histone superfamily protein | chr3:2914890-2915270 REVERSE LENGTH=126