- Predicted Gene MLOC_15954
MLOC_15954 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 9.71868 | 12.6411 | 11.9879 | 12.6228 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 14.2907 | 4.28129 | 6.26007 | 7.55184 |
| INF1 | Young developing inflorescences (5mm) | 28.1153 | 34.1068 | 35.1658 | 28.2558 |
| INF2 | Developing inflorescences (1-1.5 cm) | 37.029 | 38.0679 | 35.9946 | 42.9561 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 12.1781 | 14.9831 | 14.2563 | 19.2491 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 17.5233 | 19.4494 | 6.65008 | 60.8262 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 14.6189 | 15.611 | 11.7873 | 14.7707 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.70081 | 1.33756 | 1.79434 | 3.77038 |
CDS Structure of MLOC_15954
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_15954.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g24940.2 |
+3 |
0.0 |
804 |
415/489 (85%) |
13103.m02941 protein proline-rich family protein, putative, expressed |
| TAIR PP10 |
AT2G26770.2 |
+3 |
9e-165 |
487 |
252/483 (52%) |
plectin-related | chr2:11404257-11407743 REVERSE LENGTH=496 |