MLOC_15937 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains12.244814.449816.242513.3976
LEAShoots from the seedlings (10 cm shoot stage)34.269337.342433.28828.4724
INF1Young developing inflorescences (5mm)15.595812.379714.024511.1881
INF2Developing inflorescences (1-1.5 cm)6.813238.470079.278258.36995
ROORoots from the seedlings (10 cm shoot stage)6.067276.272879.024267.53471
NODDeveloping tillers at six leaf stage, 3rd internode21.099716.690520.222857.5329
CAR5Developing grain, bracts removed (5 DPA)22.699925.12727.124223.0531
CAR15Developing grain, bracts removed (15 DPA)2.677192.350574.095776.06662



CDS Structure of MLOC_15937






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_15937.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376168NoneNoneNoneNone
MLOC_15937.3CUST_1583_PI427708080AvailableAvailablecontig_1571915 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g32150.1 +2 7e-168 478 231/246 (94%) 13104.m03076 protein amidohydrolase family protein, expressed
TAIR PP10 AT2G35450.1 +2 3e-142 416 192/287 (67%) catalytics;hydrolases | chr2:14903201-14905361 REVERSE LENGTH=346