MLOC_15925 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.02559640.04480080.1553990.0814615
LEAShoots from the seedlings (10 cm shoot stage)11.697315.01223.455698.56608
INF1Young developing inflorescences (5mm)00.021037100.0238328
INF2Developing inflorescences (1-1.5 cm)0.0181572000.0225015
ROORoots from the seedlings (10 cm shoot stage)03.9160.06495925.83498
NODDeveloping tillers at six leaf stage, 3rd internode00.010528800.0956883
CAR5Developing grain, bracts removed (5 DPA)0.2352910.222650.373480.297764
CAR15Developing grain, bracts removed (15 DPA)1.081620.3483950.6671461.78638



CDS Structure of MLOC_15925






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_15925.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249009.1NoneNoneNoneNone
MLOC_15925.1CUST_17933_PI427708080AvailableAvailablecontig_1571887 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g04530.1 +1 0.0 608 301/506 (59%) 13103.m00467 protein cytochrome P450, putative, expressed
TAIR PP10 AT4G39490.1 +1 1e-118 367 188/517 (36%) | Symbols: CYP96A10 | cytochrome P450, family 96, subfamily A, polypeptide 10 | chr4:18365229-18366788 FORWARD LENGTH=519