MLOC_15918 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains39.229521.530527.296332.5468
LEAShoots from the seedlings (10 cm shoot stage)18.40187.8215716.204514.0699
INF1Young developing inflorescences (5mm)14.27618.419718.439417.2207
INF2Developing inflorescences (1-1.5 cm)14.541516.074312.882518.4057
ROORoots from the seedlings (10 cm shoot stage)29.762326.603318.373638.5933
NODDeveloping tillers at six leaf stage, 3rd internode52.774265.225137.6482219.344
CAR5Developing grain, bracts removed (5 DPA)16.039617.294715.897518.3143
CAR15Developing grain, bracts removed (15 DPA)3.954364.151383.994511.0536



CDS Structure of MLOC_15918






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_15918.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_15918.1CUST_11466_PI427708083AvailableAvailablecontig_1571869 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g59740.3 +2 4e-63 198 98/106 (92%) 13103.m06557 protein ADP-ribosylation factor, putative, expressed
TAIR PP10 AT3G62290.3 +2 2e-63 198 98/106 (92%) | Symbols: ARFA1E | ADP-ribosylation factor A1E | chr3:23052287-23053545 FORWARD LENGTH=181