- Predicted Gene MLOC_15917
MLOC_15917 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_15917_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_15917_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 18.3677 | 12.3377 | 14.5112 | 12.9343 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 764.579 | 1404.35 | 674.755 | 688.282 |
INF1 | Young developing inflorescences (5mm) | 0.0691704 | 0.0751842 | 0 | 0.0645366 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.55437 | 1.39349 | 2.06534 | 1.59044 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.77892 | 47.0861 | 2.26053 | 35.5358 |
NOD | Developing tillers at six leaf stage, 3rd internode | 12.6833 | 27.9489 | 0.453993 | 59.2786 |
CAR5 | Developing grain, bracts removed (5 DPA) | 43.8645 | 54.1743 | 51.9584 | 42.8312 |
CAR15 | Developing grain, bracts removed (15 DPA) | 5.92669 | 2.593 | 6.05607 | 10.3358 |
CDS Structure of MLOC_15917
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_15917.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g24070.1 |
-2 |
1e-31 |
120 |
54/89 (61%) |
13111.m02293 protein LTPL10 - Protease inhibitor/seed storage/LTP family protein precursor, expressed |
TAIR PP10 |
AT5G59310.1 |
-2 |
6e-23 |
95 |
42/86 (49%) |
| Symbols: LTP4 | lipid transfer protein 4 | chr5:23925296-23925772 REVERSE LENGTH=112 |