MLOC_15898 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.808563.787694.343144.2299
LEAShoots from the seedlings (10 cm shoot stage)6.008984.317455.524195.15892
INF1Young developing inflorescences (5mm)6.617736.558066.551455.95498
INF2Developing inflorescences (1-1.5 cm)7.13557.647837.008238.77948
ROORoots from the seedlings (10 cm shoot stage)2.339162.935243.162964.11441
NODDeveloping tillers at six leaf stage, 3rd internode3.175064.060913.1972515.9695
CAR5Developing grain, bracts removed (5 DPA)3.456363.622543.38063.80645
CAR15Developing grain, bracts removed (15 DPA)0.8662291.023221.332152.52164



CDS Structure of MLOC_15898






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_15898.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK359065NoneNoneNoneNone
MLOC_15898.4CUST_1577_PI427708080AvailableAvailablecontig_1571828 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g17700.1 +3 0.0 823 418/486 (86%) 13102.m01977 protein pyridine nucleotide-disulphide oxidoreductase domain containing protein, expressed
TAIR PP10 AT4G32360.1 +3 0.0 606 318/489 (65%) Pyridine nucleotide-disulphide oxidoreductase family protein | chr4:15621550-15624711 FORWARD LENGTH=483