- Predicted Gene MLOC_15896
MLOC_15896 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 2.82526 | 1.84965 | 1.13661 | 2.05455 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.80292 | 1.19564 | 2.84901 | 1.38734 |
| INF1 | Young developing inflorescences (5mm) | 2.12854 | 2.58224 | 2.61584 | 1.98434 |
| INF2 | Developing inflorescences (1-1.5 cm) | 2.24405 | 3.16759 | 2.4881 | 2.92453 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.09093 | 1.80455 | 3.23549 | 2.76699 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.21542 | 2.94279 | 4.4253 | 3.6784 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.61042 | 1.94695 | 1.5635 | 1.78917 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.969655 | 0.583945 | 0.422205 | 1.64818 |
CDS Structure of MLOC_15896
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_15896.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g47840.1 |
+2 |
2e-35 |
122 |
58/91 (64%) |
13103.m05159 protein retrotransposon protein, putative, unclassified |
| TAIR PP10 |
AT5G57110.2 |
-2 |
7e-16 |
81 |
39/65 (60%) |
| Symbols: ACA8, AT-ACA8 | autoinhibited Ca2+ -ATPase, isoform 8 | chr5:23109729-23116857 REVERSE LENGTH=1074 |