MLOC_1589 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_1589_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_1589_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 1.72667 | 2.78459 | 2.76875 | 2.46875 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.75046 | 1.55301 | 1.27181 | 1.35797 |
INF1 | Young developing inflorescences (5mm) | 4.29147 | 5.54576 | 6.06991 | 4.21756 |
INF2 | Developing inflorescences (1-1.5 cm) | 14.9339 | 16.0026 | 16.363 | 16.3948 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.53946 | 2.68472 | 2.81281 | 3.17554 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.82662 | 1.86487 | 1.89921 | 6.00713 |
CAR5 | Developing grain, bracts removed (5 DPA) | 10.0893 | 10.3258 | 7.74028 | 8.74302 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.60669 | 2.40166 | 3.04963 | 5.71974 |
CDS Structure of MLOC_1589
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_1589.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g30580.1 |
+2 |
4e-92 |
301 |
148/155 (95%) |
13110.m02634 protein cell division control protein 48 homolog E, putative, expressed |
TAIR PP10 |
AT3G53230.1 |
+2 |
4e-90 |
295 |
145/155 (94%) |
ATPase, AAA-type, CDC48 protein | chr3:19723416-19726489 FORWARD LENGTH=815 |