- Predicted Gene MLOC_15858
MLOC_15858 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_15858_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_15858_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 5.01684 | 6.8325 | 6.53786 | 7.04535 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 8.0326 | 7.71068 | 7.19155 | 7.31119 |
INF1 | Young developing inflorescences (5mm) | 16.6013 | 18.0419 | 18.1052 | 16.1232 |
INF2 | Developing inflorescences (1-1.5 cm) | 33.4954 | 27.6011 | 25.1533 | 34.3791 |
ROO | Roots from the seedlings (10 cm shoot stage) | 6.83545 | 7.71365 | 6.62263 | 10.8558 |
NOD | Developing tillers at six leaf stage, 3rd internode | 3.98442 | 7.0751 | 8.53632 | 27.6279 |
CAR5 | Developing grain, bracts removed (5 DPA) | 12.6194 | 12.5233 | 12.7873 | 13.7808 |
CAR15 | Developing grain, bracts removed (15 DPA) | 5.94708 | 5.76434 | 6.05269 | 14.6583 |
CDS Structure of MLOC_15858
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_15858.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g59680.1 |
+3 |
0.0 |
550 |
350/532 (66%) |
13103.m06550 protein PAPA-1-like conserved region family protein, expressed |
TAIR PP10 |
AT1G56460.1 |
+3 |
5e-61 |
216 |
173/474 (36%) |
HIT zinc finger ;PAPA-1-like conserved region | chr1:21146765-21149468 FORWARD LENGTH=502 |