MLOC_15815 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.074166.487186.154317.16766
LEAShoots from the seedlings (10 cm shoot stage)8.483673.892535.318035.24078
INF1Young developing inflorescences (5mm)12.749212.656913.880111.7921
INF2Developing inflorescences (1-1.5 cm)15.509214.304715.132516.9991
ROORoots from the seedlings (10 cm shoot stage)3.551194.278656.985765.6251
NODDeveloping tillers at six leaf stage, 3rd internode4.140355.41138.1007220.2147
CAR5Developing grain, bracts removed (5 DPA)8.026138.286058.718028.44552
CAR15Developing grain, bracts removed (15 DPA)3.634482.667144.101218.29509



CDS Structure of MLOC_15815






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_15815.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK371746NoneNoneNoneNone
MLOC_15815.3CUST_1569_PI427708080AvailableAvailablecontig_1571603 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g33549.1 +3 2e-123 367 214/353 (61%) 13106.m03463 protein protein phosphatase 2C, putative, expressed
TAIR PP10 AT5G53140.1 +3 5e-105 321 165/262 (63%) Protein phosphatase 2C family protein | chr5:21549228-21552132 FORWARD LENGTH=420