MLOC_15791 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.538654.357533.990184.37304
LEAShoots from the seedlings (10 cm shoot stage)2.52190.3954350.6549511.0244
INF1Young developing inflorescences (5mm)13.682915.403316.679114.4185
INF2Developing inflorescences (1-1.5 cm)15.903319.817917.680322.0081
ROORoots from the seedlings (10 cm shoot stage)2.954512.77974.719283.80474
NODDeveloping tillers at six leaf stage, 3rd internode0.04530260.1206370.210090.472437
CAR5Developing grain, bracts removed (5 DPA)4.398864.869995.052055.25067
CAR15Developing grain, bracts removed (15 DPA)0.7508370.4956941.085421.91815



CDS Structure of MLOC_15791






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_15791.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_15791.1CUST_9369_PI427708080AvailableAvailablecontig_1571555 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g47180.2 -3 0.0 867 421/470 (90%) 13102.m05308 protein WD repeat-containing protein, putative, expressed
TAIR PP10 AT4G33270.1 -3 0.0 635 321/473 (68%) | Symbols: CDC20.1 | Transducin family protein / WD-40 repeat family protein | chr4:16044545-16046590 REVERSE LENGTH=457