MLOC_1579 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 328.618 | 297.756 | 275.806 | 312.558 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 435.417 | 87.0995 | 67.6909 | 158.128 |
| INF1 | Young developing inflorescences (5mm) | 3.46036 | 0.705735 | 0.405783 | 1.34476 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.626192 | 0.690222 | 1.53775 | 1.08155 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.14274 | 8.66425 | 8.9332 | 9.5052 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 43.6963 | 53.1491 | 96.9474 | 179.585 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 63.8822 | 35.5341 | 49.9759 | 52.7627 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.94399 | 1.03855 | 1.60216 | 3.99062 |
CDS Structure of MLOC_1579
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_1579.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g58200.1 |
+2 |
2e-180 |
518 |
315/378 (83%) |
13104.m06107 protein protochlorophyllide reductase A, chloroplast precursor, putative, expressed |
| TAIR PP10 |
AT5G54190.1 |
+2 |
3e-162 |
471 |
268/320 (84%) |
| Symbols: PORA | protochlorophyllide oxidoreductase A | chr5:21991183-21992773 REVERSE LENGTH=405 |
