MLOC_15779 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.7963613.053815.114611.2813
LEAShoots from the seedlings (10 cm shoot stage)37.644711.432416.691317.9624
INF1Young developing inflorescences (5mm)9.010866.081336.163875.74006
INF2Developing inflorescences (1-1.5 cm)1.985183.612782.738792.88706
ROORoots from the seedlings (10 cm shoot stage)15.983312.150710.758213.3487
NODDeveloping tillers at six leaf stage, 3rd internode99.5765157.96883.9271400.317
CAR5Developing grain, bracts removed (5 DPA)3.011032.735763.225972.67363
CAR15Developing grain, bracts removed (15 DPA)0.3195450.3146610.645720.853711



CDS Structure of MLOC_15779






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_15779.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK371583NoneNoneNoneNone
MLOC_15779.1CUST_1566_PI427708080AvailableAvailablecontig_1571512 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g09740.1 +2 0.0 898 513/691 (74%) 13102.m01068 protein STRUBBELIG-RECEPTOR FAMILY 7 precursor, putative, expressed
TAIR PP10 AT4G22130.1 +2 0.0 709 402/689 (58%) | Symbols: SRF8 | STRUBBELIG-receptor family 8 | chr4:11723733-11727331 FORWARD LENGTH=703