MLOC_15756 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.978492.50331.901772.32688
LEAShoots from the seedlings (10 cm shoot stage)96.5728246.434228.99162.22
INF1Young developing inflorescences (5mm)4.21634.491514.19133.58328
INF2Developing inflorescences (1-1.5 cm)3.159053.665774.016053.97291
ROORoots from the seedlings (10 cm shoot stage)0.6326090.6912880.8646070.878476
NODDeveloping tillers at six leaf stage, 3rd internode18.492514.86414.256248.0344
CAR5Developing grain, bracts removed (5 DPA)9.6711611.362712.838211.2711
CAR15Developing grain, bracts removed (15 DPA)3.003973.800773.017067.63637



CDS Structure of MLOC_15756






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_15756.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_15756.3CUST_11459_PI427708083AvailableAvailablecontig_1571468 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g07540.1 +3 1e-76 241 115/134 (86%) 13107.m00738 protein SHOOT1 protein, putative, expressed
TAIR PP10 AT1G55480.1 +3 2e-63 206 101/134 (75%) | Symbols: ZKT | protein containing PDZ domain, a K-box domain, and a TPR region | chr1:20713822-20715351 FORWARD LENGTH=335