- Predicted Gene MLOC_15730
MLOC_15730 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_15730_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_15730_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 0.113806 | 0 | 0.0682864 | 0.0935331 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 110.58 | 186.118 | 236.325 | 156.861 |
INF1 | Young developing inflorescences (5mm) | 0.16022 | 0.369966 | 0.150863 | 0.239355 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.336868 | 0.0808428 | 0.0502491 | 0.202371 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.216277 | 0.121773 | 0.138595 | 0.189698 |
NOD | Developing tillers at six leaf stage, 3rd internode | 33.177 | 31.0854 | 55.9476 | 112.028 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.96274 | 2.28313 | 0.745506 | 1.89138 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.113804 | 0.13103 | 0.218826 | 0.44367 |
CDS Structure of MLOC_15730
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_15730.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g71190.1 |
-3 |
5e-78 |
239 |
143/183 (78%) |
13101.m07752 protein photosystem II reaction center PSB28 protein, chloroplast precursor, putative, expressed |
TAIR PP10 |
AT4G28660.1 |
-3 |
7e-57 |
184 |
89/145 (61%) |
| Symbols: PSB28 | photosystem II reaction center PSB28 protein | chr4:14150008-14150933 FORWARD LENGTH=183 |