- Predicted Gene MLOC_15707
MLOC_15707 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 62.4104 | 67.7265 | 67.2809 | 70.6182 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 457.66 | 923.282 | 754.959 | 631.539 |
| INF1 | Young developing inflorescences (5mm) | 48.7087 | 30.4066 | 37.1897 | 35.6412 |
| INF2 | Developing inflorescences (1-1.5 cm) | 17.925 | 21.4982 | 27.2573 | 25.3409 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.07045 | 9.78167 | 19.7203 | 12.3891 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 290.331 | 185.573 | 183.971 | 592.205 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 124.642 | 144.862 | 127.308 | 141.127 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.65716 | 2.05494 | 2.91118 | 5.26157 |
CDS Structure of MLOC_15707
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_15707.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os10g37180.1 |
+3 |
3e-103 |
303 |
149/164 (91%) |
13110.m03371 protein glycine cleavage system H protein, putative, expressed |
| TAIR PP10 |
AT1G32470.1 |
+3 |
4e-80 |
243 |
120/164 (73%) |
Single hybrid motif superfamily protein | chr1:11739479-11740246 REVERSE LENGTH=166 |
