MLOC_15701 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.380721.191930.8630521.24743
LEAShoots from the seedlings (10 cm shoot stage)0.9316861.328622.03671.24577
INF1Young developing inflorescences (5mm)2.782842.748372.766342.58007
INF2Developing inflorescences (1-1.5 cm)2.953722.7363.252813.52513
ROORoots from the seedlings (10 cm shoot stage)6.704364.649383.712695.73419
NODDeveloping tillers at six leaf stage, 3rd internode5.286624.362643.7887811.7024
CAR5Developing grain, bracts removed (5 DPA)1.145720.7561151.074181.04596
CAR15Developing grain, bracts removed (15 DPA)0.246670.3598420.3778510.86091



CDS Structure of MLOC_15701






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_15701.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365952NoneNoneNoneNone
MLOC_15701.1CUST_1554_PI427708080AvailableAvailablecontig_1571366 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g38800.1 +1 0.0 714 366/489 (75%) 13103.m04212 protein AAA family ATPase, putative, expressed
TAIR PP10 AT3G50930.1 +1 2e-116 369 215/492 (44%) | Symbols: BCS1 | cytochrome BC1 synthesis | chr3:18929817-18931547 FORWARD LENGTH=576