- Predicted Gene MLOC_15697
MLOC_15697 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 7.95418 | 7.29293 | 6.36567 | 7.66425 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 20.2815 | 30.8779 | 34.3757 | 24.839 |
INF1 | Young developing inflorescences (5mm) | 11.3267 | 11.1605 | 11.5304 | 10.7533 |
INF2 | Developing inflorescences (1-1.5 cm) | 20.0255 | 20.4223 | 19.9083 | 24.8756 |
ROO | Roots from the seedlings (10 cm shoot stage) | 5.18555 | 5.77453 | 3.72385 | 6.73844 |
NOD | Developing tillers at six leaf stage, 3rd internode | 9.62825 | 16.4404 | 26.4024 | 57.4424 |
CAR5 | Developing grain, bracts removed (5 DPA) | 23.9369 | 25.4938 | 23.058 | 27.0868 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.41976 | 3.17141 | 2.33809 | 8.18325 |
CDS Structure of MLOC_15697
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_15697.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g42230.1 |
-3 |
0.0 |
580 |
300/326 (92%) |
13112.m04434 protein transketolase, putative, expressed |
TAIR PP10 |
AT1G30120.1 |
-3 |
0.0 |
531 |
274/326 (84%) |
| Symbols: PDH-E1 BETA | pyruvate dehydrogenase E1 beta | chr1:10584350-10586477 REVERSE LENGTH=406 |