MLOC_15697 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.954187.292936.365677.66425
LEAShoots from the seedlings (10 cm shoot stage)20.281530.877934.375724.839
INF1Young developing inflorescences (5mm)11.326711.160511.530410.7533
INF2Developing inflorescences (1-1.5 cm)20.025520.422319.908324.8756
ROORoots from the seedlings (10 cm shoot stage)5.185555.774533.723856.73844
NODDeveloping tillers at six leaf stage, 3rd internode9.6282516.440426.402457.4424
CAR5Developing grain, bracts removed (5 DPA)23.936925.493823.05827.0868
CAR15Developing grain, bracts removed (15 DPA)3.419763.171412.338098.18325



CDS Structure of MLOC_15697






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_15697.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362291NoneNoneNoneNone
MLOC_15697.2CUST_1553_PI427708080AvailableAvailablecontig_1571354 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g42230.1 -3 0.0 580 300/326 (92%) 13112.m04434 protein transketolase, putative, expressed
TAIR PP10 AT1G30120.1 -3 0.0 531 274/326 (84%) | Symbols: PDH-E1 BETA | pyruvate dehydrogenase E1 beta | chr1:10584350-10586477 REVERSE LENGTH=406