MLOC_15661 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.370622.608891.815162.13276
LEAShoots from the seedlings (10 cm shoot stage)0.4272620.8041050.4431160.488273
INF1Young developing inflorescences (5mm)0.03116460.03196970.0779430.0422805
INF2Developing inflorescences (1-1.5 cm)0.06793690.07577910.1653750.103478
ROORoots from the seedlings (10 cm shoot stage)0.7137730.5041030.2638420.654431
NODDeveloping tillers at six leaf stage, 3rd internode0.1510.2613420.2105380.874094
CAR5Developing grain, bracts removed (5 DPA)2.392582.108212.212982.16059
CAR15Developing grain, bracts removed (15 DPA)2.833912.56863.320246.26423



CDS Structure of MLOC_15661






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_15661.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_15661.3CUST_9353_PI427708080AvailableAvailablecontig_1571244 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g02820.2 -3 0.0 1622 801/840 (95%) 13104.m00200 protein elongation factor, putative, expressed
TAIR PP10 AT1G56070.1 -3 0.0 1558 765/840 (91%) | Symbols: LOS1 | Ribosomal protein S5/Elongation factor G/III/V family protein | chr1:20968245-20971077 REVERSE LENGTH=843