MLOC_1565 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.5719031.138820.8978310.883813
LEAShoots from the seedlings (10 cm shoot stage)0.09624390.8435990.2860740.320196
INF1Young developing inflorescences (5mm)0.4033380.6534630.3723950.406535
INF2Developing inflorescences (1-1.5 cm)1.447621.299920.251291.16126
ROORoots from the seedlings (10 cm shoot stage)1.164930.5839821.379670.846646
NODDeveloping tillers at six leaf stage, 3rd internode0.46573500.2743920.250129
CAR5Developing grain, bracts removed (5 DPA)21.13420.475412.048616.2752
CAR15Developing grain, bracts removed (15 DPA)7255.137585.336905.9116901.3



CDS Structure of MLOC_1565






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_1565.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248717.1NoneNoneNoneNone
MLOC_1565.1CUST_74_PI427708080AvailableAvailablecontig_113832 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g11380.1 +1 3e-48 164 89/171 (52%) 13107.m01173 protein RAL4 - Seed allergenic protein RA5/RA14/RA17 precursor, expressed
TAIR PP10None-----