MLOC_1559 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3535170.4645280.9827460.495323
LEAShoots from the seedlings (10 cm shoot stage)0.6911540.4341350.4288180.38291
INF1Young developing inflorescences (5mm)1.031241.218372.228541.20075
INF2Developing inflorescences (1-1.5 cm)1.585772.11351.675541.93177
ROORoots from the seedlings (10 cm shoot stage)0.16022200.4046660.114224
NODDeveloping tillers at six leaf stage, 3rd internode0.4978140.4609920.3983360.975078
CAR5Developing grain, bracts removed (5 DPA)0.7269710.6902960.4965840.60159
CAR15Developing grain, bracts removed (15 DPA)00.13474300.358262



CDS Structure of MLOC_1559






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK357617
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357617CUST_13648_PI427708083NoneNoneNone
MLOC_1559.2NoneAvailableAvailablecontig_113740 (Mapped)
MLOC_27161.1NoneAvailableNonecontig_181068 (Mapped)
MLOC_46275.2NoneAvailableNonecontig_287886 (Not mapped)
MLOC_49306.1NoneAvailableNonecontig_339312 (Not mapped)
MLOC_52417.1NoneAvailableNonecontig_375175 (Mapped)
MLOC_52953.1NoneAvailableNonecontig_379334 (Mapped)
MLOC_69541.2NoneAvailableNonecontig_56586 (Mapped)
MLOC_81547.1NoneAvailableNonecontig_969141 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----