MLOC_15586 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.505731.152371.627281.47314
LEAShoots from the seedlings (10 cm shoot stage)2.515022.551862.986812.35764
INF1Young developing inflorescences (5mm)00.034375300.0387648
INF2Developing inflorescences (1-1.5 cm)000.03597870.0320522
ROORoots from the seedlings (10 cm shoot stage)4.371194.864212.794476.02339
NODDeveloping tillers at six leaf stage, 3rd internode1.104861.419690.5276593.86509
CAR5Developing grain, bracts removed (5 DPA)0.298860.6210580.8554790.693055
CAR15Developing grain, bracts removed (15 DPA)0.05493940.1247080.1607440.319295



CDS Structure of MLOC_15586






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_15586.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362738NoneNoneNoneNone
MLOC_15586.1CUST_1547_PI427708080AvailableAvailablecontig_1571063 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g18820.1 -2 4e-82 258 157/230 (68%) 13106.m02009 protein serine threonine kinase, putative, expressed
TAIR PP10 AT5G47740.1 -2 7e-34 128 77/186 (41%) Adenine nucleotide alpha hydrolases-like superfamily protein | chr5:19338688-19339683 FORWARD LENGTH=244