- Predicted Gene MLOC_15580
MLOC_15580 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 5.28608 | 4.2442 | 4.35818 | 4.82548 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.13686 | 0.680147 | 0.0408264 | 0.554941 |
| INF1 | Young developing inflorescences (5mm) | 0.049113 | 0 | 0.0309475 | 0.0346298 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0 | 0 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 65.1237 | 56.1793 | 63.2099 | 78.0763 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.0213221 | 0 | 0.0160151 | 0.02254 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0 | 0.0588835 | 0.105901 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.0272924 | 0 | 0.040183 | 0.0700888 |
CDS Structure of MLOC_15580
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_15580.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g32920.5 |
+3 |
0.0 |
594 |
308/425 (72%) |
13104.m03166 protein potassium transporter, putative, expressed |
| TAIR PP10 |
AT4G13420.1 |
+3 |
7e-135 |
414 |
216/426 (51%) |
| Symbols: HAK5, ATHAK5 | high affinity K+ transporter 5 | chr4:7797038-7802174 REVERSE LENGTH=785 |