- Predicted Gene MLOC_15558
MLOC_15558 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.82009 | 1.99398 | 3.30547 | 2.88949 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.756635 | 0.930505 | 0.842158 | 0.687606 |
| INF1 | Young developing inflorescences (5mm) | 0.836377 | 0.710852 | 0.749427 | 0.733732 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.346382 | 0.184212 | 0.109257 | 0.268534 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 6.90082 | 3.4483 | 3.60701 | 4.36123 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.6923 | 5.796 | 9.67619 | 17.8667 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 5.42899 | 6.73193 | 5.27911 | 6.57777 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 6.90566 | 5.16807 | 6.19886 | 16.3227 |
CDS Structure of MLOC_15558
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_15558.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g55070.1 |
+3 |
1e-153 |
441 |
235/320 (73%) |
13104.m05704 protein gibberellin 20 oxidase 2, putative |
| TAIR PP10 |
AT3G19010.1 |
+3 |
1e-31 |
124 |
89/290 (31%) |
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr3:6556306-6557862 REVERSE LENGTH=349 |