MLOC_1553 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains12.800510.24611.21710.6546
LEAShoots from the seedlings (10 cm shoot stage)16.240615.092217.526413.5913
INF1Young developing inflorescences (5mm)19.039319.375924.238316.1806
INF2Developing inflorescences (1-1.5 cm)26.032226.402427.50127.3673
ROORoots from the seedlings (10 cm shoot stage)15.399816.638717.259519.1088
NODDeveloping tillers at six leaf stage, 3rd internode15.503216.300917.795654.1995
CAR5Developing grain, bracts removed (5 DPA)12.089512.048811.879510.9576
CAR15Developing grain, bracts removed (15 DPA)7.74787.817276.4013515.984



CDS Structure of MLOC_1553






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK376609
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376609CUST_26097_PI427708080NoneNoneNone
MLOC_1553.1NoneAvailableAvailablecontig_113713 (Mapped)
MLOC_19139.1NoneAvailableNonecontig_158365 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----