MLOC_15523 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.429692.668532.291973.07881
LEAShoots from the seedlings (10 cm shoot stage)6.742222.648914.421944.00999
INF1Young developing inflorescences (5mm)10.775312.362514.546510.4639
INF2Developing inflorescences (1-1.5 cm)18.97619.105117.677920.4845
ROORoots from the seedlings (10 cm shoot stage)2.806424.610764.401585.12015
NODDeveloping tillers at six leaf stage, 3rd internode4.728558.8428913.044230.7533
CAR5Developing grain, bracts removed (5 DPA)8.147277.942897.639727.69751
CAR15Developing grain, bracts removed (15 DPA)1.383581.106172.167223.30449



CDS Structure of MLOC_15523






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_15523.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_15523.1CUST_2266_PI427708083AvailableAvailablecontig_1570923 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g40710.1 -3 1e-45 162 111/189 (59%) 13106.m04241 protein Myb-like DNA-binding domain containing protein, putative, expressed
TAIR PP10 AT2G01060.2 -3 1e-17 81 55/112 (49%) myb-like HTH transcriptional regulator family protein | chr2:73456-74556 REVERSE LENGTH=237