- Predicted Gene MLOC_15522
MLOC_15522 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 8.10478 | 6.97399 | 7.47907 | 7.8391 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 18.5971 | 37.4558 | 36.879 | 27.3735 |
| INF1 | Young developing inflorescences (5mm) | 11.1205 | 14.0713 | 12.6028 | 11.0598 |
| INF2 | Developing inflorescences (1-1.5 cm) | 17.9352 | 16.3033 | 16.5732 | 19.2966 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 5.44314 | 10.1535 | 7.2406 | 11.7963 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 10.0009 | 12.411 | 16.1926 | 45.9222 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 12.2058 | 16.6031 | 13.5668 | 14.9317 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 8.76324 | 9.62035 | 10.3669 | 22.2925 |
CDS Structure of MLOC_15522
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_15522.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g40720.1 |
+3 |
4e-134 |
393 |
187/224 (83%) |
13106.m04243 protein EF hand family protein, putative, expressed |
| TAIR PP10 |
AT4G26470.1 |
+3 |
6e-100 |
305 |
148/207 (71%) |
Calcium-binding EF-hand family protein | chr4:13371377-13372343 FORWARD LENGTH=231 |