MLOC_15510 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.44419.051129.241948.95636
LEAShoots from the seedlings (10 cm shoot stage)6.0680910.276811.89148.20045
INF1Young developing inflorescences (5mm)3.120143.004372.527272.44289
INF2Developing inflorescences (1-1.5 cm)3.213163.776743.814893.9394
ROORoots from the seedlings (10 cm shoot stage)8.8051211.07119.5889213.3492
NODDeveloping tillers at six leaf stage, 3rd internode4.767565.582245.1946218.0421
CAR5Developing grain, bracts removed (5 DPA)4.119224.069435.309414.39938
CAR15Developing grain, bracts removed (15 DPA)1.916952.055771.721364.43326



CDS Structure of MLOC_15510






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_15510.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362581NoneNoneNoneNone
MLOC_15510.1CUST_1537_PI427708080AvailableAvailablecontig_1570881 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g46020.1 -2 0.0 560 313/454 (69%) 13104.m04622 protein GATA zinc finger domain containing protein, expressed
TAIR PP10 AT4G17570.3 -2 1e-58 208 143/312 (46%) | Symbols: GATA26 | GATA transcription factor 26 | chr4:9784329-9786974 REVERSE LENGTH=514