- Predicted Gene MLOC_15510
MLOC_15510 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 7.4441 | 9.05112 | 9.24194 | 8.95636 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 6.06809 | 10.2768 | 11.8914 | 8.20045 |
INF1 | Young developing inflorescences (5mm) | 3.12014 | 3.00437 | 2.52727 | 2.44289 |
INF2 | Developing inflorescences (1-1.5 cm) | 3.21316 | 3.77674 | 3.81489 | 3.9394 |
ROO | Roots from the seedlings (10 cm shoot stage) | 8.80512 | 11.0711 | 9.58892 | 13.3492 |
NOD | Developing tillers at six leaf stage, 3rd internode | 4.76756 | 5.58224 | 5.19462 | 18.0421 |
CAR5 | Developing grain, bracts removed (5 DPA) | 4.11922 | 4.06943 | 5.30941 | 4.39938 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.91695 | 2.05577 | 1.72136 | 4.43326 |
CDS Structure of MLOC_15510
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_15510.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g46020.1 |
-2 |
0.0 |
560 |
313/454 (69%) |
13104.m04622 protein GATA zinc finger domain containing protein, expressed |
TAIR PP10 |
AT4G17570.3 |
-2 |
1e-58 |
208 |
143/312 (46%) |
| Symbols: GATA26 | GATA transcription factor 26 | chr4:9784329-9786974 REVERSE LENGTH=514 |