MLOC_15500 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains27.67513.291515.61190
LEAShoots from the seedlings (10 cm shoot stage)15.567812.846415.73550
INF1Young developing inflorescences (5mm)30.878738.661542.29780
INF2Developing inflorescences (1-1.5 cm)43.039939.727441.20030
ROORoots from the seedlings (10 cm shoot stage)33.57321.019620.74640
NODDeveloping tillers at six leaf stage, 3rd internode11.521220.479732.15760
CAR5Developing grain, bracts removed (5 DPA)34.97235.246935.85510
CAR15Developing grain, bracts removed (15 DPA)10.56779.749769.892870



CDS Structure of MLOC_15500






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK251055.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251055.1CUST_18946_PI427708080NoneNoneNone
MLOC_15500.2NoneAvailableNonecontig_1570853 (Mapped)
MLOC_36622.1NoneAvailableNonecontig_2547062 (Mapped)
MLOC_54988.1NoneAvailableAvailablecontig_39553 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----